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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787593.1_cds_XP_016504517.1_183
CDS Infomation

[gene=LOC107822449] [db_xref=GeneID:107822449] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g07650] [protein_id=XP_016504517.1] [location=join(56713..56824,56935..57109,58177..58248,58355..58423,58530..58601,59330..59401,59509..59580,59865..59936,60086..60157,60242..60313,60425..60496,61060..61131,61234..61299,61574..61639,61722..61760,61914..61972,62412..62806,62891..63086,63575..63727,64392..64510,64684..64894,65004..65244,65767..65917,66142..66513)] [gbkey=CDS]
Sequence

ATGAGCATAATGCTTCTTAAATCTATATTCTCTTCTTCTTTTTTCCTAGTTTTCTTCACA
GTTCACTGTTTAGCAGCCAGTAATTCCAAGTCCAAGCTCCATCCAGCAGAAGTGAAAGCA
TTGAAAGAGATAGCCAAAAAGCTTGGGAAAAGAGATTGGGATTTTGACAAGGATCCTTGC
AGTGGAGAAGGGAATTGGAGTGTTGCAGTTACTGTTAAAGGACTTGAGAGTTCTGTTGCT
TGTGATTGCTCTTTTAACAACAATTCGACCTGTCATATTACCTCCATAGCTCTGAAAGCA
CAGAATATTTCAGCAAATGTTCCACCAGAATTCGCCCAACTTCGCCATCTTAAGCAATTG
GACCTCAGCCGTAATTATCTCAATGGTTCAATACCGTCTCAGTGGGCGTCACTGCGCTTG
CTTGGCCTCTCTGTTATGGGAAACCACTTGTCTGGTCCATTTCCAAAAGTTCTCACCAAA
ATCCCTACGCTTAGGAACCTGAGCATTGAAGGAAACAGATTTTCAGGATCAATTCCTCCA
GAAATTGGCAATTTGGTTCATATGGAAAAGCTCGTGTTGTCCTCGAATGAATTCACCGGA
GCTTTGCCACCCACATTAGCCAAGCTAACCAACTTAACTGATTTGAGGATAAGTGACAAC
AATTTTACTGGAAAGATACCAAAATTTATCAGCAACTGGACAAAAATTGAGAAACTGCAT
ATACAAGGCTGTTCTCTTGAGGGTCCTATCCCTTCTGCTATATCTTCCCTTACAAGCTTA
ATTGATTTAAGGATCAGTGACCTAAAAAGTGGAAAATCTGGTTTTCCACCATTAGATAAT
CTAGAATCCATGAAAGTACTAATACTAAGGAAGTGCTTAATTCATGGTGAGATTCCTGAA
TATATAGGGGACATGAAGAAATTAAAGACACTGGACCTTAGTTTTAACAGCTTGTCTGGT
GAGATCCCGTCATCTTTTCTACACCTATCCAAAGTAGATTTTATGTATTTGACAGGAAAC
AAACTTACTGGACCTGTTCCTGAGTGGATATTATCAAGAAATAAGAATGTAGACGTTTCG
TATAACAATTTTACATGGGAAACCACAGCACCTATTGAATGCCCGCGTGGAAGCGTAAAC
TTGGTGGAGAGCTATTCTGCGTTGGGACAAGAATCAAACAAAGTTCATCCTTGCCTGAAG
CATGATTTCCCTTGTTCAGAACCAACAAATAAGCAACAGTATTCTTTGTACATCAATTGT
GGAGGCAAGGAAGTATCGATCAAGAATGGTACAAGCCGCAAAACATATGAAGCTGATTTA
GAAGCCAGAGGTGCTTCTATGTATTATTCAAGACATAACTGGGCATTTAGCAGCACAGGA
AATTTCATGGACAATGACGTTGATTCTGATGTCTATATCGATACCAATGTCTCTGCCCTG
CTTAATGTCAAGGCTCCAGAAGTTGAACTATACAAAACTGCACGTGCATCTCCCCTCTCC
CTCACATATTATGGACAGTGTCTAATGAATGGAAACTATACTGTCAAGCTCCATTTTGCG
GAGATAATATTCACAAATGACACTTCATTCAACAGTCTTGGAGAACGGATATTTGATGTG
TACTTGCAGGAAAATTTGGTGTTGAAGGATTTTAACATTGCAAAAGAAGCTGGTGGGCCG
GGGCAGCCCATTGTGAAAACTTTCACTGCAGCTGTGACAAGCCACACGCTGAAGATCCAT
TTTTACTGGGCAGGAAAGGGGACTACAGGAATTCCCGTTAGAGGGGTTTATGGTCCTCTA
ATTTCTGCTATATCAGTGGATCCTAATTTTACACCTCCTTTGCCTGCCGCTCAACGGAGT
AAAATTCATGTTGGCATATTGGCCGGGGCAATAGCTGGATCGGTGTTTGTTTTCCTTCTG
ATCATTGGTATCTTATATAAGAGAGGTTGTCTTGGAGAAAAAGTATCTGCTGATAAAGAA
CTTCAAGGACTGGATCTACAAGCTGGACTATTTACTCTCAGACAGATTAAAGCCGCGACA
AAGAATTTTGACCCAGAAAACAAGATAGGGGAAGGTGGTTTTGGCTCAGTTTATAAGGGT
CTATTATCTGATGGAACAGTAATCGCAGTGAAGCAACTTTCTTCAAAGTCAAAACAAGGA
ACTAGAGAATTTTTGAATGAAGTAGGCATGATATCTGCAGTACAACATCCGAATCTCGTG
AAGCTTTATGGATGTTGCATTCAAGGAAATCAACTATTGCTAGTGTACGAGTACATGGAA
AATAACTGTGTATCTCGTGCTCTTTTTGGCAAAGGCCCAATCTGCAAAATGAAATTAGAC
TGGCCGACACGAAGGAAAATTTGCCTAGGAATTGCAAGAGGTTTAGCATACCTTCACGAG
GAGTCAAGCATGAAGATAGTCCACAGAGATATCAAGACCAGTAATATTTTGCTTGACAAG
GACTTCAATCCTAAAATATCCGATTTTGGCTTGGCAAAGCTACATGAGGATGATAATACC
CATATTAGTACGCGGATTGCAGGAACTGTGGGTTACATGGCTCCAGAATATGCAATGCGC
GGCTACTTAACTAGTAAAGCAGATATTTACAGCTATGGAGTTGTTGCATTGGAGATTGTT
AGTGGGAAAAGCAATACAAATTATAGGCCAGCGGAAGATTGTGTTTATCTTCTTGATTGG
GCTTATGTTATGCAAGAGCGCGGGAGTATATTGGAATTGGTTGATCCAGACTTATGTTCC
AACTACTCAACACAAGAAGCAATGGTGGTACTAAATGTTGCACTTTCATGCACTAATGCA
TCTCCAACACTTAGACCAACAATGTCTCAAGTGGTAAGCATGCTCGAAGGCCAAACTCTC
GTTCAAGATGTCCTTTCTGATCCAGGGATTTCAACAACCGGTTCAGGATTCAGATCGATG
AGAAGTCACTTCTGGCAAACTCAAAGCCTGTCAACTGATGGTACGCGTACTGATTCCACT
ATCTCAATTGGAGATGGAGAAGAAAATGGTATACTTCAAAGAGTTGAATCTTCTGTACTA
TCTAATAAGTAA

Peptide Sequence

PEP ID

XP_016504517.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 [Nicotiana tabacum]
Sequence

MSIMLLKSIFSSSFFLVFFTVHCLAASNSKSKLHPAEVKALKEIAKKLGKRDWDFDKDPC
SGEGNWSVAVTVKGLESSVACDCSFNNNSTCHITSIALKAQNISANVPPEFAQLRHLKQL
DLSRNYLNGSIPSQWASLRLLGLSVMGNHLSGPFPKVLTKIPTLRNLSIEGNRFSGSIPP
EIGNLVHMEKLVLSSNEFTGALPPTLAKLTNLTDLRISDNNFTGKIPKFISNWTKIEKLH
IQGCSLEGPIPSAISSLTSLIDLRISDLKSGKSGFPPLDNLESMKVLILRKCLIHGEIPE
YIGDMKKLKTLDLSFNSLSGEIPSSFLHLSKVDFMYLTGNKLTGPVPEWILSRNKNVDVS
YNNFTWETTAPIECPRGSVNLVESYSALGQESNKVHPCLKHDFPCSEPTNKQQYSLYINC
GGKEVSIKNGTSRKTYEADLEARGASMYYSRHNWAFSSTGNFMDNDVDSDVYIDTNVSAL
LNVKAPEVELYKTARASPLSLTYYGQCLMNGNYTVKLHFAEIIFTNDTSFNSLGERIFDV
YLQENLVLKDFNIAKEAGGPGQPIVKTFTAAVTSHTLKIHFYWAGKGTTGIPVRGVYGPL
ISAISVDPNFTPPLPAAQRSKIHVGILAGAIAGSVFVFLLIIGILYKRGCLGEKVSADKE
LQGLDLQAGLFTLRQIKAATKNFDPENKIGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQG
TREFLNEVGMISAVQHPNLVKLYGCCIQGNQLLLVYEYMENNCVSRALFGKGPICKMKLD
WPTRRKICLGIARGLAYLHEESSMKIVHRDIKTSNILLDKDFNPKISDFGLAKLHEDDNT
HISTRIAGTVGYMAPEYAMRGYLTSKADIYSYGVVALEIVSGKSNTNYRPAEDCVYLLDW
AYVMQERGSILELVDPDLCSNYSTQEAMVVLNVALSCTNASPTLRPTMSQVVSMLEGQTL
VQDVLSDPGISTTGSGFRSMRSHFWQTQSLSTDGTRTDSTISIGDGEENGILQRVESSVL
SNK

Transcript Sequence

Gene sequence data has not been registered.